Affymetrix Services

CUGI now offers a complement of Affymetrix services using the GeneChip® Scanner 3000 7G platform and two GeneChip® Fluidics Station 450s.

miRNA Profiling


The Affymetrix GeneChip® miRNA array supports miRNA coverage for more than 70 organisms. CUGI provides analysis of Affymetrix miRNA chips using an Affymetrix GeneChip® Scanner 3000 7G.

Custom Array Analysis

Affymetrix's MyGeneChip™ Custom Array Program provide highest-resolution data on a single array, tailored to your specific research needs. Custom Arrays offer an expanded selection of custom solutions, including whole-transcript expression, exon analysis, ChIP-on-chip, transcript mapping, SNP discovery, 3' expression, resequencing, and whole-genome genotyping.

Gene Regulation Analysis

Affymetrix GeneChip® Tiling Arrays are comprehensive arrays available for discovering novel RNA transcripts (transcript mapping) or mapping sites of protein/DNA interaction in chromatin immunoprecipitation experiments (ChIP-on-Chip).

GWAS and Genotyping

The Affymetrix GeneChip® SNP array can be used for genotyping and/or for identifying genetic associations with traits across a given genome, also known as genome-wide association study (GWAS).

Copy Number Analysis


The Affymetrix Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. This chip is a valuable tool for exploring the role of copy number in human disease.

Gene Expression Analysis


With the Affymetrix GeneScan® Scanner 3000 7G platform CUGI provides whole-transcript or 3' IVT gene expression profiling of whole or partial genomes using existing Affymetrix microarrays.

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